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Scalable VCF format

Scalable VCF format

AI/ML/LLM, Data Science, Knowledge Graph, LLMs, Precision Medicine, RAG, Variant Analysis, Variant Databases

Scalable VCF format Scalable VCF improves storage, scalability The default Variant Call Format (VCF) scales poorly, requiring 900 tebibytes (TiB) for a 150,000-genome VCF, since it densely represents both reference-genotypes and allele-indexed arrays leading to...
Open Reaction Database (ORD)

Open Reaction Database (ORD)

AI/ML/LLM, Bioinformatics, Biotechnology, Data Consortia, Data Resources, Data Science

Open Reaction Database (ORD) AI-driven drug discovery is improved with knowledge of a molecule’s synthesis pathway and cost. The Open Reaction Database (ORD) recently received an extensive update of new reactions. Also great to see Dr Coley’s team get some...
Human Tumor Atlas Network (Nature)

Human Tumor Atlas Network (Nature)

Biotechnology, Data Consortia, Data Science, Single Cell, Spatial

Human Tumor Atlas Network (Nature) Nature published the Human Tumor Atlas Network to expand spatial understanding of molecular, cellular and tissue features. HTAN offers a multidimensional view of cancer...

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